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Overcoming the sensor delta for semantic segmentation in OCT images

Niemeijer, Joshua and Ehrhardt, Jan and Kepp, Timo and Handels, Heinz and Schaefer, Jörg P. (2023) Overcoming the sensor delta for semantic segmentation in OCT images. In: Medical Imaging 2023: Computer-Aided Diagnosis. SPIE Medical Imaging, 2023-02-19 - 2023-02-24, San Diego. doi: 10.1117/12.2654187. ISBN 978-151066035-9. ISSN 1605-7422.

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Abstract

The performance of a segmentation network optimized on data from a specific type of OCT sensor will decrease when applied to data from a different sensor. In this work, we deal with the research question of adapting models to data from an unlabeled new sensor with new properties in an unsupervised way. This challenge is known as unsupervised domain adaptation and can alleviate the need for costly manual annotation by radiologists. We show that one can strongly improve a model's result that was trained in a supervised way on the source OCT sensor domain on the target sensor domain. We do this by aligning the source and target domain distributions in the feature space through a semantic clustering method. Apart from the unsupervised domain adaptation we improved even the supervised training compared to the results in the RETOUCH challenge by employing a sophisticated training strategy. The RETOUCH challenge contains three different types of OCT scanners and provides annotations for the task of disease-related fluid classes.

Item URL in elib:https://elib.dlr.de/198541/
Document Type:Conference or Workshop Item (Speech)
Title:Overcoming the sensor delta for semantic segmentation in OCT images
Authors:
AuthorsInstitution or Email of AuthorsAuthor's ORCID iDORCID Put Code
Niemeijer, JoshuaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Ehrhardt, JanUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kepp, TimoUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Handels, HeinzUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schaefer, Jörg P.UNSPECIFIEDhttps://orcid.org/0000-0002-9985-5169166620287
Date:April 2023
Journal or Publication Title:Medical Imaging 2023: Computer-Aided Diagnosis
Refereed publication:No
Open Access:No
Gold Open Access:No
In SCOPUS:Yes
In ISI Web of Science:No
DOI:10.1117/12.2654187
ISSN:1605-7422
ISBN:978-151066035-9
Status:Published
Keywords:OCT, Segmentation, Unsupervised Learning, Domain Adaptation
Event Title:SPIE Medical Imaging
Event Location:San Diego
Event Type:international Conference
Event Start Date:19 February 2023
Event End Date:24 February 2023
HGF - Research field:Aeronautics, Space and Transport
HGF - Program:Transport
HGF - Program Themes:Road Transport
DLR - Research area:Transport
DLR - Program:V ST Straßenverkehr
DLR - Research theme (Project):V - KoKoVI - Koordinierter kooperativer Verkehr mit verteilter, lernender Intelligenz
Location: Braunschweig
Institutes and Institutions:Institute of Transportation Systems
Institute of Transportation Systems > Cooperative Systems, BS
Deposited By: Niemeijer, Joshua
Deposited On:05 Dec 2023 14:52
Last Modified:17 Oct 2024 08:18

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