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MEmilio v1.3.0 - A high performance Modular EpideMIcs simuLatIOn software

Kühn, Martin Joachim and Abele, Daniel and Kerkmann, David and Korf, Sascha Alexander and Zunker, Henrik and Wendler, Anna Clara and Bicker, Julia and Nguyen, Khoa and Schmieding, Rene and Plötzke, Lena and Lenz, Patrick and Betz, Maximilian Franz and Gerstein, Carlotta and Schmidt, Agatha and Hannemann-Tamas, Ralf and Waßmuth, Nils and Johannssen, Paul and Tritzschak, Hannah and Richter, Daniel and Klitz, Margrit and Koslow, Wadim and Binder, Sebastian and Siggel, Martin and Kleinert, Jan and Rack, Kathrin and Lutz, Annette and Meyer-Hermann, Michael (2024) MEmilio v1.3.0 - A high performance Modular EpideMIcs simuLatIOn software. [Other]

Full text not available from this repository.

Official URL: https://doi.org/10.5281/zenodo.14237545

Abstract

MEmilio implements various models for infectious disease dynamics, from simple compartmental (ODE) models through Integro-Differential equation-based (IDE) models (sometimes also denoted "age of infection models") to agent- or individual-based models (ABMs). Its modular design allows the combination of different models with different mobility patterns. Through efficient implementation and parallelization, MEmilio brings cutting edge and compute intensive epidemiological models to a large scale, enabling a precise and high-resolution spatiotemporal infectious disease dynamics.

Item URL in elib:https://elib.dlr.de/209739/
Document Type:Other
Title:MEmilio v1.3.0 - A high performance Modular EpideMIcs simuLatIOn software
Authors:
AuthorsInstitution or Email of AuthorsAuthor's ORCID iDORCID Put Code
Kühn, Martin JoachimMartin.Kuehn (at) dlr.dehttps://orcid.org/0000-0002-0906-6984UNSPECIFIED
Abele, DanielDaniel.Abele (at) dlr.dehttps://orcid.org/0000-0001-7021-1573172915436
Kerkmann, Daviddavidchristian.kerkmann (at) helmholtz-hzi.deUNSPECIFIEDUNSPECIFIED
Korf, Sascha AlexanderSascha.Korf (at) dlr.dehttps://orcid.org/0000-0002-1431-3046UNSPECIFIED
Zunker, Henrikhenrik.zunker (at) dlr.dehttps://orcid.org/0000-0002-9825-365X172915437
Wendler, Anna Claraanna.wendler (at) dlr.dehttps://orcid.org/0000-0002-1816-8907UNSPECIFIED
Bicker, Juliajulia.bicker (at) dlr.dehttps://orcid.org/0000-0001-9382-4209UNSPECIFIED
Nguyen, KhoaHelmholtz Centre for Infection ResearchUNSPECIFIEDUNSPECIFIED
Schmieding, ReneRene.Schmieding (at) dlr.dehttps://orcid.org/0000-0002-2769-0270UNSPECIFIED
Plötzke, LenaLena.Ploetzke (at) dlr.dehttps://orcid.org/0000-0003-0440-1429172915440
Lenz, Patrickpatrick.lenz (at) dlr.deUNSPECIFIEDUNSPECIFIED
Betz, Maximilian FranzMaximilian.Betz (at) dlr.deUNSPECIFIEDUNSPECIFIED
Gerstein, Carlottacarlotta.gerstein (at) dlr.dehttps://orcid.org/0009-0004-4410-0502UNSPECIFIED
Schmidt, AgathaAgatha.Schmidt (at) dlr.deUNSPECIFIEDUNSPECIFIED
Hannemann-Tamas, RalfForschungszentrum JülichUNSPECIFIEDUNSPECIFIED
Waßmuth, NilsUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Johannssen, Paulpaul.johannssen (at) dlr.deUNSPECIFIEDUNSPECIFIED
Tritzschak, HannahHannah.Tritzschak (at) dlr.deUNSPECIFIEDUNSPECIFIED
Richter, Danieldaniel.richter (at) dlr.deUNSPECIFIEDUNSPECIFIED
Klitz, MargritDeutsches Zentrum für Neurodegenerative Erkrankungenhttps://orcid.org/0000-0003-3657-4180UNSPECIFIED
Koslow, WadimWadim.Koslow (at) dlr.deUNSPECIFIEDUNSPECIFIED
Binder, SebastianDepartment of Systems Immunology and Braunschweig Integrated Centre of Systems Biology (BRICS), Helmholtz Centre for Infection Researchhttps://orcid.org/0000-0003-1169-1786UNSPECIFIED
Siggel, Martinmartin.siggel (at) dlr.dehttps://orcid.org/0000-0002-3952-4659UNSPECIFIED
Kleinert, JanJan.Kleinert (at) dlr.dehttps://orcid.org/0000-0002-2709-214X172915442
Rack, KathrinKathrin.Rack (at) dlr.dehttps://orcid.org/0000-0002-5794-5705172915443
Lutz, AnnetteAnnette.Lutz (at) dlr.deUNSPECIFIEDUNSPECIFIED
Meyer-Hermann, MichaelDepartment of Systems Immunology and Braunschweig Integrated Centre of Systems Biology (BRICS), Helmholtz Centre for Infection Researchhttps://orcid.org/0000-0002-4300-2474UNSPECIFIED
Date:28 November 2024
Journal or Publication Title:zenodo
Refereed publication:No
Open Access:No
DOI:10.5281/zenodo.14237545
Status:Published
Keywords:Scientific computing, mathematical modeling, software framework, High-performance computing, infectious diseases, agent-based modeling, metapopulation models, mobility
HGF - Research field:Aeronautics, Space and Transport
HGF - Program:Space
HGF - Program Themes:Space System Technology
DLR - Research area:Raumfahrt
DLR - Program:R SY - Space System Technology
DLR - Research theme (Project):R - Tasks SISTEC
Location: Köln-Porz
Institutes and Institutions:Institute of Software Technology
Institute of Software Technology > High-Performance Computing
Deposited By: Kühn, Dr. Martin Joachim
Deposited On:02 Dec 2024 14:16
Last Modified:04 Nov 2025 10:41

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