Meringer, Markus und Schymanski, Emma L. (2013) Small Molecule Identification with MOLGEN and Mass Spectrometry. Metabolites, 3 (2), Seiten 440-462. Multidisciplinary Digital Publishing Institute (MDPI). doi: 10.3390/metabo3020440. ISSN 2218-1989.
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Offizielle URL: http://www.mdpi.com/2218-1989/3/2/440
Kurzfassung
This paper details the MOLGEN entries for the 2012 CASMI contest for small molecule identification to demonstrate structure elucidation using structure generation approaches. Different MOLGEN programs were used for different categories, including MOLGEN–MS/MS for Category 1, MOLGEN 3.5 and 5.0 for Category 2 and MOLGEN–MS for Categories 3 and 4. A greater focus is given to Categories 1 and 2, as most CASMI participants entered these categories. The settings used and the reasons behind them are described in detail, while various evaluations are used to put these results into perspective. As one author was also an organiser of CASMI, these submissions were not part of the official CASMI competition, but this paper provides an insight into how unknown identification could be performed using structure generation approaches. The approaches are semi-automated (category dependent) and benefit greatly from user experience. Thus, the results presented and discussed here may be better than those an inexperienced user could obtain with MOLGEN programs.
elib-URL des Eintrags: | https://elib.dlr.de/87832/ | ||||||||||||
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Dokumentart: | Zeitschriftenbeitrag | ||||||||||||
Titel: | Small Molecule Identification with MOLGEN and Mass Spectrometry | ||||||||||||
Autoren: |
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Datum: | 28 Mai 2013 | ||||||||||||
Erschienen in: | Metabolites | ||||||||||||
Referierte Publikation: | Ja | ||||||||||||
Open Access: | Ja | ||||||||||||
Gold Open Access: | Ja | ||||||||||||
In SCOPUS: | Nein | ||||||||||||
In ISI Web of Science: | Ja | ||||||||||||
Band: | 3 | ||||||||||||
DOI: | 10.3390/metabo3020440 | ||||||||||||
Seitenbereich: | Seiten 440-462 | ||||||||||||
Verlag: | Multidisciplinary Digital Publishing Institute (MDPI) | ||||||||||||
ISSN: | 2218-1989 | ||||||||||||
Status: | veröffentlicht | ||||||||||||
Stichwörter: | CASMI; mass spectrometry; MOLGEN; MOLGEN–MS; MOLGEN–MS/MS; small molecule identification; structure generation; structure elucidation | ||||||||||||
HGF - Forschungsbereich: | Luftfahrt, Raumfahrt und Verkehr | ||||||||||||
HGF - Programm: | Raumfahrt | ||||||||||||
HGF - Programmthema: | Erdbeobachtung | ||||||||||||
DLR - Schwerpunkt: | Raumfahrt | ||||||||||||
DLR - Forschungsgebiet: | R EO - Erdbeobachtung | ||||||||||||
DLR - Teilgebiet (Projekt, Vorhaben): | R - Vorhaben Entwicklung von Atmosphärenprozessoren (alt) | ||||||||||||
Standort: | Oberpfaffenhofen | ||||||||||||
Institute & Einrichtungen: | Institut für Methodik der Fernerkundung > Atmosphärenprozessoren | ||||||||||||
Hinterlegt von: | Meringer, Dr.rer.nat. Markus | ||||||||||||
Hinterlegt am: | 24 Jan 2014 14:43 | ||||||||||||
Letzte Änderung: | 28 Mär 2023 23:41 |
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